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1

A missense mutation in CLIC2 associated with intellectual disability is predicted by in silico modeling to affect protein stability and dynamics

Shawn Witham, Kyoko Takano, Charles Schwartz, Emil Alexov

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2011

Language:

english

File:

PDF, 431 KB

english, 2011

2

Developing hybrid approaches to predict pKa values of ionizable groups

Shawn Witham, Kemper Talley, Lin Wang, Zhe Zhang, Subhra Sarkar, Daquan Gao, Wei Yang, Emil Alexov

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2011

Language:

english

File:

PDF, 599 KB

english, 2011

3

DelPhi: a comprehensive suite for DelPhi software and associated resources

Li, Lin, Li, Chuan, Sarkar, Subhra, Zhang, Jie, Witham, Shawn, Zhang, Zhe, Wang, Lin, Smith, Nicholas, Petukh, Marharyta, Alexov, Emil

Journal:

Year:

2012

Language:

english

File:

PDF, 1.07 MB

english, 2012

4

Modeling CLIC2-RyR Interactions and the Effect of Disease Causing Mutation

Witham, Shawn, Alexov, Emil

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 36 KB

english, 2012

5

In Silico Investigation of a Missense Mutation in CLIC2 Associated with Intellectual Disability

Witham, Shawn, Takano, Kyoko, Schwartz, Charles, Alexov, Emil

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 51 KB

english, 2011

6

On the role of electrostatics in protein–protein interactions

Zhang, Zhe, Witham, Shawn, Alexov, Emil

Journal:

Physical Biology

Year:

2011

Language:

english

File:

PDF, 594 KB

english, 2011

7

ProBLM Web Server: Protein and Membrane Placement and Orientation Package

Kimmett, Taylor, Smith, Nicholas, Witham, Shawn, Petukh, Marharyta, Sarkar, Subhra, Alexov, Emil

Journal:

Computational and Mathematical Methods in Medicine

Year:

2014

Language:

english

File:

PDF, 2.40 MB

english, 2014

8

A rational free energy-based approach to understanding and targeting disease-causing missense mutations

Zhang, Zhe, Witham, Shawn, Petukh, Marharita, Moroy, Gautier, Miteva, Maria, Ikeguchi, Yoshihiko, Alexov, Emil

Journal:

Journal of the American Medical Informatics Association

Year:

2013

Language:

english

File:

PDF, 736 KB

english, 2013

9

In Silico Investigation of pH-Dependence of Prolactin and Human Growth Hormone Binding to Human Prolactin Receptor

Wang, Lin, Witham, Shawn, Zhang, Zhe, Li, Lin, Hodsdon, Michael, Alexov, Emil

Journal:

Communications in Computational Physics

Year:

2013

Language:

english

File:

PDF, 821 KB

english, 2013

10

DelPhi Web Server: A Comprehensive Online Suite for Electrostatic Calculations of Biological Macromolecules and Their Complexes

Sarkar, Subhra, Witham, Shawn, Zhang, Jie, Zhenirovskyy, Maxim, Rocchia, Walter, Alexov, Emil

Journal:

Communications in Computational Physics

Year:

2013

File:

PDF, 1014 KB

2013